Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2026-05-11
Page range: 305-338
Abstract views: 2
PDF downloaded: 0

Two new rain frogs of the Pristimantis leptolophus species group (Anura: Strabomantidae) from the high elevations of the Cordillera Occidental, Southwestern Colombia

Calima; Fundación para la Investigación de la Biodiversidad y Conservación en el Trópico; Cali; Colombia.; Department of Evolution; Ecology; and Organismal Biology; University of California; Riverside; CA 92521; USA.
Grupo de investigación en Ecología Animal; Facultad de Ciencias Naturales y Exactas; Universidad del Valle; Cali; Colombia.
Grupo de investigación en Ecología Animal; Facultad de Ciencias Naturales y Exactas; Universidad del Valle; Cali; Colombia.
Amphibia Advertisement call amphibia threatened species IUCN páramo Parque Nacional Natural Farallones de Cali taxonomy Valle del Cauca

Abstract

The Colombian Tropical Andes constitute an important area in terms of diversity and endemism of amphibian species. However, some studies have documented gaps in taxonomic information in these regions due to a lack of exploration, especially in the highest areas. The Parque Nacional Natural Farallones de Cali (PNN Farallones de Cali) is a protected area located in southwestern Colombia that brings together the Tropical Andes and Tumbes-Chocó-Magdalena biodiversity hotspots. This protected area holds a historical record of 112 named amphibian species, of which 36 are threatened according to the International Union for Conservation of Nature (IUCN) Red List and 44 are endemic to Colombia. However, the highest peaks of this national park have remained unexplored due to the political instability of the country, the presence of illegal productive activities, and operational and logistical difficulties of access. Fortunately, owing to the combination of human and institutional efforts, possibilities for exploration and the development of scientific activities have become available in the last decade. During recent explorations of the high Andean forest and páramo ecosystems of the PNN Farallones de Cali, we discovered two new threatened species herein in the Pristimantis leptolophus species group based on molecular, bioacoustic, and morphological evidence. The first species is distinguished by its polymorphic coloring patterns, the small size of the males, the presence of a small papilla at the tip of the snout, and its advertisement call, which is composed of a stereotyped group of 3–10 tonal notes that are widely separated by intervals of silence. The second new species is distinguished by the presence of a small papilla at the tip of the snout, and by lacking dorsolateral folds. These findings emphasize the importance of preserving the Andean and páramo ecosystems, which are home to several amphibian species and numerous others that remain undiscovered, highlighting the need to continue to explore uncharted areas in the Colombian Andes for a better understanding of Colombian amphibian diversity.

 

References

  1. Acosta-Galvis, A.R. (2023) Lista de los Anfibios de Colombia: Referencia en línea. Batrachia, Villa de Leyva, Boyacá. Available from: http://www.batrachia.com/ (accessed 3 April 2024)
  2. Bejarano-Muñoz, P., Ron, S.R., Navarrete, M.J. & Yánez-Muñoz, M.H. (2022) Dos nuevas especies del grupo Pristimantis boulengeri (Anura: Strabomantidae) de la cuenca alta del río Napo, Ecuador. Cuadernos de Herpetología, 36 (2), 125–154.
  3. Bernal, M.H. & Lynch, J.D. (2008) Review and analysis of altitudinal distribution of the Andean anurans in Colombia. Zootaxa, 1826 (1), 1–25. https://doi.org/10.11646/zootaxa.1826.1.1
  4. Bernal, M.H., Montealegre, D.P. & Páez, C.A. (2004) Estudio de la vocalización de trece especies de anuros del municipio de Ibagué, Colombia. Revista de la Academia Colombiana de Ciencias, 28 (108), 385–390. https://doi.org/10.18257/raccefyn.28(108).2004.2135
  5. Bioacoustics Research Program (2017) Raven Pro: Interactive Sound Analysis Software. The Cornell Lab of Ornithology, Ithaca, New York. [software]
  6. Bota-Sierra, C.A., Novelo-Gutiérrez, R. & Amaya-Vallejo, V. (2017) The rediscovery and redescription of Epigomphus pechumani Belle, 1970 (Odonata: Gomphidae), with a description of its female from the Western Colombian Andes. Zootaxa, 4306 (3), 419–427. https://doi.org/10.11646/zootaxa.4306.3.8
  7. Boulenger, G.A. (1882) Catalogue of the Batrachia Salientia s. Ecaudata in the collection of the British Museum. Printed by order of the Trustees, London, 503 pp.
  8. Boulenger, G.A. (1896) II.—Descriptions of new reptiles and batrachians from Colombia. Journal of Natural History, 17 (97), 16–21. https://doi.org/10.1080/00222939608680317
  9. Boulenger, G.A. (1912) Descriptions of new batrachians from the Andes of South America, preserved in the British Museum. Annals and Magazine of Natural History, Series 8, 10 (56), 185–191. https://doi.org/10.1080/00222931208693215
  10. Chaves-Acuña, W., Moreno, E.A. & Yánez-Muñoz, M.H. (2023) The advertisement call of Pristimantis unistrigatus (Anura: Strabomantidae) from the Ecuadorian Andes. Phyllomedusa, 22 (1), 49–55. https://doi.org/10.11606/issn.2316-9079.v22i1p49-55
  11. Cuellar-Valencia, O.M., Arriaga-Jaramillo, F.G., García-Gómez, I., Ceballos-Castro, I., Bolívar-García, W., Velásquez-Trujillo, D.A., Ortiz-Baez, A.S. & Ospina-Sarria, J.J. (2021) Two new species of Pristimantis (Anura: Strabomantidae) from the Serranía de los Paraguas: a priority site for conservation of amphibians in Colombia. Herpetologica, 77 (1), 72–84. https://doi.org/10.1655/Herpetologica-D-20-00003.1
  12. Cuellar-Valencia, O.M., Bolaños-Molina, B.E. & Bolívar-García, W. (2024) Exploring the acoustic diversity of Andean frogs in the Farallones de Cali National Natural Park, southwestern Colombia. Studies on Neotropical Fauna and Environment, 59 (3), 804–822. https://doi.org/10.1080/01650521.2023.2266187
  13. Cuellar-Valencia, O.M., Murillo-García, O.E., Rodriguez, G.A. & Bolívar-García, W. (2023) Bioaccumulation of mercury in direct-developing frogs: The aftermath of illegal gold mining in a National Park. Herpetological Journal, 33 (1), 6–13. https://doi.org/10.33256/33.1.613
  14. De Queiroz, K. (2007) Species concepts and species delimitation. Systematic Biology, 56 (6), 879–886. https://doi.org/10.1080/10635150701701083
  15. Duarte-Marín, S. (2024) The advertisement call of the robber frog Pristimantis peraticus in a population from the eastern slope of the Colombian central Andes. The Herpetological Bulletin, 170, 38–41. https://doi.org/10.33256/hb170.3841
  16. Duellman, W.E. & Lehr, E. (2009) Terrestrial-breeding frogs (Strabomantidae) in Peru. Natur und Tier-Verlag GmbH, Berlin, 382 pp.
  17. Flórez-V, C. & Evangelista, O. (2017) New species in the treehopper genus Bocydium Latreille, with description of nymphal stages and observations on their natural history. Zootaxa, 4281 (1), 22–57. https://doi.org/10.11646/zootaxa.4281.1.4
  18. García-R, J.C., Crawford, A.J., Mendoza, Á.M., Ospina, O., Cardenas, H. & Castro, F. (2012) Comparative phylogeography of direct-developing frogs (Anura: Craugastoridae: Pristimantis) in the southern Andes of Colombia. PLoS ONE, 7 (9), e46077. https://doi.org/10.1371/journal.pone.0046077
  19. Goin, C.J. & Cochran, D.M. (1963) Two new genera of leptodactylid frogs from Colombia. Proceedings of the California Academy of Sciences, XXXI (17), 499–505.
  20. González-Durán, G.A. (2016) A new small frog species of the genus Pristimantis (Anura: Craugastoridae) from the northern paramos of Colombia. Zootaxa, 4066 (4), 421. https://doi.org/10.11646/zootaxa.4066.4.4
  21. González-Durán, G.A., Targino, M., Rada, M. & Grant, T. (2017) Phylogenetic relationships and morphology of the Pristimantis leptolophus species group (Amphibia: Anura: Brachycephaloidea), with the recognition of a new species group in Pristimantis Jiménez de la Espada, 1870. Zootaxa, 4243 (1), 42–74. https://doi.org/10.11646/zootaxa.4243.1.2
  22. Günther, A.C.L.G. (1859) Second list of cold-blooded vertebrata collected by Mr. Fraser in the Andes of western Ecuador. Proceedings of the Zoological Society of London, 1859, 402–420.
  23. Heinicke, M.P., Duellman, W.E. & Hedges, S.B. (2007) Major Caribbean and Central American frog faunas originated by ancient oceanic dispersal. Proceedings of the National Academy of Sciences, 104 (24), 10092–10097. https://doi.org/10.1073/pnas.0611051104
  24. Hill, A.P., Prince, P., Piña Covarrubias, E., Doncaster, C.P., Snaddon, J.L. & Rogers, A. (2018) AudioMoth: Evaluation of a smart open acoustic device for monitoring biodiversity and the environment. In: Isaac, N. (Ed.). Methods in Ecology and Evolution, 9 (5), pp. 1199–1211. https://doi.org/10.1111/2041-210X.12955
  25. IUCN (2012) IUCN Red List Categories and Criteria: Version 3.1. 2nd Edition. IUCN, Gland and Cambridge, iv + 32 pp.
  26. IUCN (2024) The IUCN Red List of Threatened Species. Version 2023-1. IUCN, Gland and Cambridge. Available from: https://www.iucnredlist.org (accessed 7 April 2026)
  27. Kalyaanamoorthy, S., Minh, B.Q., Wong, T.K.F., von Haeseler, A. & Jermiin, L.S. (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nature Methods, 14 (6), 587–589. https://doi.org/10.1038/nmeth.4285
  28. Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics, 20 (4), 1160–1166. https://doi.org/10.1093/bib/bbx108
  29. Kattan, G. (1986) Nueva especie de rana (Atelopus) de Los Farallones de Cali, Cordillera Occidental de Colombia. Caldasia, 14 (68–70), 651–657.
  30. Köhler, J., Jansen, M., Rodríguez, A., Kok, P.J.R., Toledo, L.F., Emmrich, M., Glaw, F., Haddad, C.F.B., Rödel, M.-O. & Vences, M. (2017) The use of bioacoustics in anuran taxonomy: theory, terminology, methods and recommendations for best practice. Zootaxa, 4251 (1), 1–124. https://doi.org/10.11646/zootaxa.4251.1.1
  31. Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33 (7), 1870–1874. https://doi.org/10.1093/molbev/msw054
  32. Larsson, A. (2014) AliView: a fast and lightweight alignment viewer and editor for large datasets. Bioinformatics, 30 (22), 3276–3278. https://doi.org/10.1093/bioinformatics/btu531
  33. Laurance, W.F., Carolina Useche, D., Shoo, L.P., Herzog, S.K., Kessler, M., Escobar, F., Brehm, G., Axmacher, J.C., Chen, I.-C., Gámez, L.A., Hietz, P., Fiedler, K., Pyrcz, T., Wolf, J., Merkord, C.L., Cardelus, C., Marshall, A.R., Ah-Peng, C., Aplet, G.H., del Coro Arizmendi, M., Baker, W.J., Barone, J., Brühl, C.A., Bussmann, R.W., Cicuzza, D., Eilu, G., Favila, M.E., Hemp, A., Hemp, C., Homeier, J., Hurtado, J., Jankowski, J., Kattán, G., Kluge, J., Krömer, T., Lees, D.C., Lehnert, M., Longino, J.T., Lovett, J., Martin, P.H., Patterson, B.D., Pearson, R.G., Peh, K.S.-H., Richardson, B., Richardson, M., Samways, M.J., Senbeta, F., Smith, T.B., Utteridge, T.M.A., Watkins, J.E., Wilson, R., Williams, S.E. & Thomas, C.D. (2011) Global warming, elevational ranges and the vulnerability of tropical biota. Biological Conservation, 144 (1), 548–557. https://doi.org/10.1016/j.biocon.2010.10.010
  34. Lüddecke, H., Amézquita, A., Bernal, X. & Guzmán, F. (2000) Partitioning of vocal activity in a Neotropical highland-frog community. Studies on Neotropical Fauna and Environment, 35 (3), 185–194. https://doi.org/10.1076/snfe.35.3.185.8855
  35. Lynch, J.D. (1980) New species of Eleutherodactylus of Colombia (Amphibia: Leptodactylidae). I: five new species from the paramos of the Cordillera Central. Caldasia, XIII (61), 165–188.
  36. Lynch, J.D. (1981) Two new species of Eleutherodactylus from western Colombia (Amphibia: Anura: Leptodactylidae). Occasional papers of the museum of zoology University of Michigan, 697, 1–12.
  37. Lynch, J.D. (1986) Origins of the high Andean herpetological fauna. In: Vuilleumier, F. & Monasterio, M. (Eds.), High altitude tropical biogeography. Oxford University Press, Oxford, pp. 478–479.
  38. Lynch, J.D. (1991) New diminutive Eleutherodactylus from the Cordillera Central of Colombia (Amphibia: Leptodactylidae). Journal of Herpetology, 25 (3), 344–352. https://doi.org/10.2307/1564595
  39. Lynch, J.D. (1995) Three new species of Eleutherodactylus from paramos of the Cordillera Occidental of Colombia. Journal of Herpetology, 29 (4), 513–521. https://doi.org/10.2307/1564734
  40. Lynch, J.D. (1998) New species of Eleutherodactylus from the Cordillera Occidental of western Colombia with synopsis of the distributions of species in western Colombia. Revista de la Academia Colombiana de Ciencias, XXII (82), 117–148. https://doi.org/10.18257/raccefyn.22(82).1998.2880
  41. Lynch, J.D. (1999) Lista anotada y clave para las ranas (género Eleutherodactylus) chocoanas del Valle Del Cauca, y apuntes sobre las especies de la Cordillera Occidental adyacente. Caldasia, 21 (2), 182–202.
  42. Lynch, J.D. (2001) A small amphibian fauna from a previously unexplored paramo of the Cordillera Occidental in Western Colombia. Journal of Herpetology, 35 (2), 226–231. https://doi.org/10.2307/1566112
  43. Lynch, J.D. & Duellman, W.E. (1997) 1997 Frogs of the genus Eleutherodactylus (Leptodactylidae) in western Ecuador: systematics, ecology, and biogeography. Natural History Museum The University of Kansas, Lawrence, Kansas, IV + 236 pp.
  44. https://doi.org/10.5962/bhl.title.7951
  45. Lynch, J.D. & Rueda-Almonacid, J.V. (1998) New frogs of the genus Eleutherodactylus from the eastern flank of the northern Cordillera Central of Colombia. Revista de la Academia Colombiana de Ciencias, XXII (85), 561–570. https://doi.org/10.18257/raccefyn.22(85).1998.2946
  46. Lynch, J.D. & Ruiz-Carranza, P.M. (1983) New frogs of the genus Eleutherodactylus from the Andes of southern Colombia. Transactions of the Kansas Academy of Science, 86 (4), 99–112. https://doi.org/10.2307/3628163
  47. Lynch, J.D. & Suárez-Mayorga, Á.M. (2002) Análisis biogeográfico de los anfibios paramunos. Caldasia, 24 (2), 471–480.
  48. Maddison, W.P. & Maddison, D.R. (2021) Mesquite: a modular system for evolutionary analysis. Available from: http://www.mesquiteproject.org/ (accessed 7 April 2026)
  49. Marin, C.M., Molina-Zuluaga, C., Restrepo, A., Cano, E. & Daza, J.M. (2018) A new species of Leucostethus (Anura: Dendrobatidae) from the eastern versant of the Central Cordillera of Colombia and the phylogenetic status of Colostethus fraterdanieli. Zootaxa, 4461 (3), 359–380. https://doi.org/10.11646/zootaxa.4464.3.3
  50. Minh, B.Q., Nguyen, M.A.T. & Von Haeseler, A. (2013) Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution, 30 (5), 1188–1195. https://doi.org/10.1093/molbev/mst024
  51. Moreno, J.S., Galindo-tarazona, R., Alegria-Valencia, M., Sierra-Ariza, M.A., Mora-A., D.L. & Tróchez, A.Z. (2023) Blossoming legacies: eight new Lepanthes (Orchidaceae: Pleurothallidinae) species from Los Farallones de Cali National Park named in honor of Colombian women. Harvard Papers in Botany, 28 (2). 663–693. https://doi.org/10.3100/hpib.v28iss2.2023.n4
  52. Myers, C.W. & Daly, J.W. (1976) Preliminary evaluation of skin toxins and vocalizations in taxonomic and evolutionary studies of poison-dart frogs (Dendrobatidae). Bulletin of the American Museum of Natural History, 157, 173–262.
  53. Navas, C.A. (1996) The effect of temperature on the vocal activity of tropical anurans: a comparison of high and low-elevation species. Journal of Herpetology, 30 (4), 488–497. https://doi.org/10.2307/1565691
  54. Navas, C.A. (2006) Patterns of distribution of anurans in high Andean tropical elevations: insights from integrating biogeography and evolutionary physiology. Integrative and Comparative Biology, 46 (1), 82–91. https://doi.org/10.1093/icb/icj001
  55. Nguyen, L.-T., Schmidt, H.A., Von Haeseler, A. & Minh, B.Q. (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution, 32 (1), 268–274. https://doi.org/10.1093/molbev/msu300
  56. Ospina-Sarria, J.J. & Duellman, W.E. (2019) Two new species of Pristimantis (Amphibia: Anura: Strabomantidae) from southwestern Colombia. Herpetologica, 75 (1), 85. https://doi.org/10.1655/D-18-00019
  57. Palumbi, S.R., Martin, A.P., Romano, S.L., McMillan, W.O., Stice, L. & Grabowski, R. (1991) The simple fool’s guide to PCR. Department of Zoology, University of Hawaii, Honolulu, 43 pp.
  58. Pardo Locarno, L.C. & Villalobos Moreno, A. (2020) Two new species of Golofa Hope, 1837 (Coleoptera: Melolonthidae: Dynastinae) from the Colombian Andes, south America. Boletín Científico Centro de Museos Museo de Historia Natural, 24 (1), 231–241. https://doi.org/10.17151/bccm.2020.24.1.12
  59. Patiño-Ocampo, E., Duarte-Marín, S. & Rivera-Correa, M. (2022) Genética, bioacústica y morfología revelan una nueva especie oculta en Pristimantis dorsopictus (Anura: Strabomantidae). Revista Latinoamericana de Herpetología, 5 (1), 60–90. https://doi.org/10.22201/fc.25942158e.2022.1.305
  60. Pinto-Sánchez, N.R., Ibáñez, R., Madriñán, S., Sanjur, O.I., Bermingham, E. & Crawford, A.J. (2012) The great American biotic interchange in frogs: multiple and early colonization of Central America by the South American genus Pristimantis (Anura: Craugastoridae). Molecular Phylogenetics and Evolution, 62 (3), 954–972. https://doi.org/10.1016/j.ympev.2011.11.022
  61. Ridout, M.S. & Linkie, M. (2009) Estimating overlap of daily activity patterns from camera trap data. Journal of Agricultural, Biological, and Environmental Statistics, 14 (3), 322–337. https://doi.org/10.1198/jabes.2009.08038
  62. Rivera-Correa, M., Jiménez-Rivillas, C. & Daza, J.M. (2017) Phylogenetic analysis of the Neotropical Pristimantis leptolophus species group (Anura: Craugastoridae): molecular approach and description of a new polymorphic species. Zootaxa, 4242 (2), 313–343. https://doi.org/10.11646/zootaxa.4242.2.6
  63. Rivera-Correa, M., Ospina-L, A.M., Rojas-Montoya, M., Venegas-Valencia, K., Rueda-Solano, L.A., Gutiérrez-Cárdenas, P.D.A. & Vargas-Salinas, F. (2021) Cantos de las ranas y los sapos de Colombia: estado actual del conocimiento y perspectivas de investigación en ecoacústica. Neotropical Biodiversity, 7 (1), 350–363. https://doi.org/10.1080/23766808.2021.1957651
  64. Rodríguez-Salazar, G.A., Fierro-Perdomo, A.J., Cuellar-Valencia, O.M., Orozco-Chamorro, S., González-Durán, G.A., Suárez-Mayorga, Á.M. & Galindo-Tarazona, R. (2023) Guía ilustrada: anfibios y reptiles del Parque Nacional Natural Farallones de Cali. Proceditor Ltda, Bogotá D.C., 264 pp.
  65. Romero Ruíz, M.H., Cabrera Montenegro, E. & Ortiz Pérez, N. (2008) Informe sobre el estado de la biodiversidad en Colombia: 2006–2007. Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá D.C., 181 pp.
  66. Romero-Garcia, J., Clavijo-Garzon, S. & Bernal, M.H. (2015) The advertisement call of three highland endemic species (Anura: Craugastoridae) from the Andean mountains of Colombia. Zootaxa, 4007 (2), 298–300. https://doi.org/10.11646/zootaxa.4007.2.14
  67. RStudio Team (2023) RStudio: Integrated Development for R. Posit Software, PBC, Boston, Massachusetts. Avaialble from: https://posit.co/downloads (accessed 7 April 2026)
  68. Ruiz-Carranza, P.M., Ardila-Robayo, M.C. & Lynch, J.D. (1996) Lista actualizada de la fauna de Amphibia de Colombia. Revista de la Academia Colombiana de Ciencias, XX (77), 365–415. https://doi.org/10.18257/raccefyn.20(77).1996.3042
  69. Saboyá Acosta, L.P. & Urbina-Cardona, J.N. (2023) Current state of knowledge of Páramo amphibians in Colombia: spatio temporal trends and information gaps to be strengthened for effective conservation. Tropical Conservation Science, 16, 194008292311699. https://doi.org/10.1177/19400829231169984
  70. Santos, J.C., Coloma, L.A. & Cannatella, D.C. (2003) Multiple, recurring origins of aposematism and diet specialization in poison frogs. PNAS, 100 (22), 12792–12797. https://doi.org/10.1073/pnas.2133521100
  71. Sueur, J., Aubin, T. & Simonis, C. (2008) Seewave, a free modular tool for sound analysis and synthesis. Bioacoustics, 18 (2), 213–226. https://doi.org/10.1080/09524622.2008.9753600
  72. Urbina-Cardona, J.N. (2011) Gradientes andinos en la diversidad y patrones de endemismo en anfibios y reptiles de Colombia: posibles respuestas al cambio climático. Revista Facultad de Ciencias Básicas, 7 (1), 74–91.

How to Cite

Cuellar-Valencia, O.M., Bolaños-Molina, B.E. & Bolívar-García, W. (2026) Two new rain frogs of the Pristimantis leptolophus species group (Anura: Strabomantidae) from the high elevations of the Cordillera Occidental, Southwestern Colombia. Zootaxa, 5807 (2), 305–338. https://doi.org/10.11646/zootaxa.5807.2.4