Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2021-09-01
Page range: 301-331
Abstract views: 390
PDF downloaded: 25

Review of the Chinese species of Deleaster Erichson, 1839 (Coleoptera, Staphylinidae, Oxytelinae) with a mitogenome of Deleaster bactrianus Semenov, 1900

Key Laboratory of Animal Diversity of Hebei Province, Langfang Normal University Aiminxidao 100, Anci District, Langfang, Hebei 065000, China
Key Laboratory of Animal Physiology, Biochemistry and Molecular Biology of Hebei Province, College of Life Sciences, Hebei Normal University, No.20 Road East. 2nd Ring South, Yuhua District, Shijiazhuang, Hebei 050024, China
Coleoptera Oxytelinae Deleaster China key new record mitochondrial genome phylogeny

Abstract

Deleaster Erichson is an oxyteline genus with only 12 species worldwide, but its members have very distinctive appearance and bear primitive characters, which are particularly critical in understanding the evolution of Oxytelinae. Here we review the species in China and provide a new record species, Deleaster bactrianus Semenov, to Chinese fauna of this genus. Additionally, we describe the first complete mitochondrial genome of Deleaster.

 

References

  1. Al Arab, M., Höner zu Siederdissen, C., Tout, K., Sahyoun, A.H., Stadler, P.F. & Bernt, M. (2017) Accurate annotation of protein-coding genes in mitochondrial genomes. Molecular Phylogenetics and Evolution, 106, 209–216. https://doi.org/10.1016/j.ympev.2016.09.024
    Bernhauer, M. & Schubert, K. (1911) Staphylinidae II (Pars 29). In: W. Junk and S. Schenkling (Eds), Coleopterorum Catalogus. W. Junk, Berlin, pp. 87–190.
    Bouchard, P., Bousquet, Y., Davies, A., Alonso-Zarazaga, M., Lawrence, J., Lyal, C., Newton, A., Reid, C., Schmitt, M., Slipinski, A. & Smith, A. (2011) Family-group names in Coleoptera (Insecta). ZooKeys, 88, 1–972. https://doi.org/10.3897/zookeys.88.807
    Butt, A.M., Nasrullah, I., Qamar, R. & Tong, Y. (2016) Evolution of codon usage in Zika virus genomes is host and vector specific. Emerging Microbes & Infections, 5, e107. https://doi.org/10.1038/emi.2016.106
    Castoe, T.A., Sasa, M.M. & Parkinson, C.L. (2005) Modeling nucleotide evolution at the mesoscale: The phylogeny of the Neotropical pitvipers of the Porthidium group (Viperidae: Crotalinae). Molecular Phylogenetics and Evolution, 37, 881–898. https://doi.org/10.1016/j.ympev.2005.05.013
    Chakraborty, S., Barbhuiya, P.A., Paul, S., Uddin, A., Choudhury, Y., Ahn, Y. & Cho, Y.S. (2020) Codon usage trend in genes associated with obesity. Biotechnology Letters, 42, 1865–1875. https://doi.org/10.1007/s10529-020-02931-z
    Coiffait, H. (1979) Staphylinides du Nouristan (Afghanistan) [Coleoptera]. Annales de la Société entomologique de France, New Series, 14, 551–569.
    Criscuolo, A. & Gribaldo, S. (2010) BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments. BMC Evolutionary Biology, 10, 210. https://doi.org/10.1186/1471-2148-10-210
    Donath, A., Jühling, F., Al-Arab, M., Bernhart, S.H., Reinhardt, F., Stadler, P.F., Middendorf, M. & Bernt, M. (2019) Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes. Nucleic Acids Research, 47, 10543–10552. https://doi.org/10.1093/nar/gkz833
    Erichson, W.F. (1839) Genera et Species Staphylinorum Insectorum Coleopterorum Familiae. F. H. Morin, Berlin, pp. 1–400. https://doi.org/10.5962/bhl.title.59644
    Fairmaire, L. (1893) Description d’une nouvelle espèce de Staphylinide. Bulletin de la Société Entomologique de France, 62, ccxii.
    Grebennikov, K.A. (2002) Western Palaearctic species of the genus Deleaster Erichson, 1839 (Coleoptera: Staphylinidae: Oxytelinae). Zoosystematica Rossica, 10, 373–378.
    Gruber, A.R., Bernhart, S.H. & Lorenz, R. (2015) The ViennaRNA Web Services. In: Picardi, E. (Ed.), RNA Bioinformatics. Methods in Molecular Biology. Springer, New York, New York, pp. 307–326. https://doi.org/10.1007/978-1-4939-2291-8_19
    Hayashi, Y. (1984) Notes on Staphylinidae from Taiwan (Col.) 2. Entomological Review of Japan, 39, 91–93.
    Herman, L.H. (1970) Phylogeny and reclassification of the genera of the rove-beetle subfamily Oxytelinae of the world (Coleoptera, Staphylinidae). Bulletin of the American Museum of Natural History, 142, 345–454.
    Herman, L.H. (2001) Catalog of the Staphylinidae (Insecta, Coleoptera): 1758 to the end of the second millennium. Vol. 3. Oxyteline group. Bulletin of the American Museum of Natural History, 265, 1067–1806. https://doi.org/10.1206/0003-0090.265.1.3
    Hoang, D.T., Chernomor, O., von Haeseler, A., Minh, B.Q. & Vinh, L.S. (2018) UFBoot2: improving the ultrafast bootstrap approximation. Molecular Biology and Evolution, 35, 518–522. https://doi.org/10.1093/molbev/msx281
    Jenkins Shaw, J. (2018) Significant range expansion for the rove beetle genus Deleaster, based on a new species from Papua New Guinea (Coleoptera: Staphylinidae: Oxytelinae). Acta Entomologica Musei Nationalis Pragae, 58, 21–24. https://doi.org/10.2478/aemnp-2018-0004
    Kalyaanamoorthy, S., Minh, B.Q., Wong, T.K.F., von Haeseler, A. & Jermiin, L.S. (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nature Methods, 14, 587–589. https://doi.org/10.1038/nmeth.4285
    Kashcheev, V.A. (1999) New Oxytelinae (Coleoptera, Staphylinidae) from Central Asia and Kazakhstan [Новые Oxytelinae (Coleoptera, Staphylinidae) Средней Азии и Казахстана]. Tethys Entomological Research, 1, 141–156.
    Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30, 772–780. https://doi.org/10.1093/molbev/mst010
    Khachikov, E.A. (2012) To the knowledge of taxonomy of the subfamily Oxytelinae Fleming, 1821 (Coleoptera: Staphylinidae) [К познанию таксономии подсемейства Oxytelinae Fleming, 1821 (Coleoptera: Staphylinidae)]. Caucasian Entomological Bulletin [Кавказский Энтомологический Бюллетень], 8, 213–231. https://doi.org/10.23885/1814-3326-2012-8-2-213-231
    Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018) MEGA X: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35, 1547–1549. https://doi.org/10.1093/molbev/msy096
    Le, S.Q. & Gascuel, O. (2008) An improved general amino acid replacement matrix. Molecular Biology and Evolution, 25, 1307–1320. https://doi.org/10.1093/molbev/msn067
    Le, S.Q., Gascuel, O. & Lartillot, N. (2008) Empirical profile mixture models for phylogenetic reconstruction. Bioinformatics, 24, 2317–2323. https://doi.org/10.1093/bioinformatics/btn445
    Löbl, I. & Smetana, A. (2004) Catalogue of Palaearctic Coleoptera. Vol. 2. Hydrophiloidea—Histeroidea—Staphylinoidea. Apollo Books, Stenstrup, 942 pp. https://doi.org/10.1163/9789004501522
    Lü, L., Cai, C.-Y., Zhang, X., Newton, A.F., Thayer, M.K. & Zhou, H.-Z. (2020) Linking evolutionary mode to palaeoclimate change reveals rapid radiations of staphylinoid beetles in low-energy conditions. Current Zoology 66, 435–444. https://doi.org/10.1093/cz/zoz053
    Makranczy, G. (2006) Systematics and phylogenetic relationships of the genera in the Carpelimus group (Coleoptera: Staphylinidae: Oxytelinae). Annales Historico-Naturales Musei Nationalis Hungarici, 98, 29–119.
    McKenna, D.D., Farrell, B.D., Caterino, M.S., Farnum, C.W., Hawks, D.C., Maddison, D.R., Seago, A.E., Short, A.E.Z., Newton, A.F. & Thayer, M.K. (2015) Phylogeny and evolution of Staphyliniformia and Scarabaeiformia: Forest litter as a stepping stone for diversification of nonphytophagous beetles. Systematic Entomology, 40, 35–60. https://doi.org/10.1111/syen.12093
    Meng, G., Li, Y., Yang, C. & Liu, S. (2019) MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization. Nucleic Acids Research, 47, e63. https://doi.org/10.1093/nar/gkz173
    Minh, B.Q., Schmidt, H.A., Chernomor, O., Schrempf, D., Woodhams, M.D., von Haeseler, A. & Lanfear, R. (2020) IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Molecular Biology and Evolution 37, 1530–1534. https://doi.org/10.1093/molbev/msaa015
    Rambaut, A. (2018) FigTree: Free figure drawing tool. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 17 August 2021)
    Reitter, E. (1909) 2 Fauna Germanica. Die Käfer des Deutschen Reiche. Nach der analytischen Methode bearbeitet. K. G. Lutz, Stuttgart, 392 pp.
    Schülke, M. & Smetana, A. (2015) Staphylinidae. In: Löbl, I. & Löbl, D. (Eds.), Hydrophiloidea—Staphylinoidea: Revised and Updated Edition. Catalogue of Palearctic Coleoptera Vols. 2/1 & 2/2. Brill, Leiden, pp. 304–1134.
    Semenov, A. (1900) Coleoptera asiatica nova. Horae Societatis Entomologicae Rossicae 34, 676–688.
    Smetana, A. (2019) A new species of Deleaster Erichson, 1839 from the Himalaya, with treatment of an unrecorded name in the genus (Coleoptera: Staphylinidae: Oxytelinae: Deleasterini). Taxonomical Series 15, 223–229.
    Song, N., Zhai, Q. & Zhang, Y. (2021) Higher-level phylogenetic relationships of rove beetles (Coleoptera, Staphylinidae) inferred from mitochondrial genome sequences. Mitochondrial DNA Part A 32, 98–105. https://doi.org/10.1080/24701394.2021.1882444
    Wong, E.H.M., Smith, D.K., Rabadan, R., Peiris, M. & Poon, L.L.M. (2010) Codon usage bias and the evolution of influenza A viruses. Codon usage biases of influenza virus. BMC Evolutionary biology 10, 253. https://doi.org/10.1186/1471-2148-10-253
    Yamamoto, S. (2021) Tachyporinae revisited: phylogeny, evolution, and higher classification based on morphology, with recognition of a new rove beetle subfamily (Coleoptera: Staphylinidae). Biology 10, 323. https://doi.org/10.3390/biology10040323
    Yang, Z.-H. (1994) Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. Journal of Molecular Evolution 39, 306–314. https://doi.org/10.1007/BF00160154
    Zhang, D., Gao, F., Jakovlić, I., Zou, H., Zhang, J., Li, W.X. & Wang, G.T. (2020) PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Molecular Ecology Resources. [published online] https://doi.org/10.1111/1755-0998.13096
    Zhang, X. & Zhou, H.-Z. (2013) How old are the rove beetles (Insecta: Coleoptera: Staphylinidae) and their lineages? Seeking an answer with DNA. Zoological Science 30, 490–501. https://doi.org/10.2108/zsj.30.490
    Zhao, T.-Y., Zhang, C.-J. & Lü, L. (2021) Comparative description of the mitochondrial genome of Scaphidium formosanum Pic, 1915 (Coleoptera: Staphylinidae: Scaphidiinae). Zootaxa 4941, 487–510. https://doi.org/10.11646/zootaxa.4941.4.2

  2.