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Type: Article
Published: 2020-03-05
Page range: 182–194
Abstract views: 263
PDF downloaded: 108

A genomic perspective on the taxonomy of the subtribe Carcharodina (Lepidoptera: Hesperiidae: Carcharodini)

Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX, USA 75390-9050
Laubacher Str. 4, 35423 Lich, Hessen, Germany
Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX, USA 75390-9050 present address: Institute for Protein Design and Department of Biochemistry, University of Washington, 1959 NE Pacific Street, HSB J-405, Seattle, WA, USA 98195
Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX, USA 75390-9050
Howard Hughes Medical Institute and 2Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX, USA 75390-9050
Lepidoptera taxonomy genomic sequencing phylogeny grizzled skippers marbled skippers

Abstract

We obtained whole genome shotgun sequences and phylogenetically analyzed protein-coding regions of representative skipper butterflies from the genus Carcharodus Hübner, [1819] and its close relatives. Type species of all available genus-group names were sequenced. We find that species attributed to four exclusively Old World genera (Spialia Swinhoe, 1912, Gomalia Moore, 1879, Carcharodus Hübner, [1819] and Muschampia Tutt, 1906) form a monophyletic group that we call a subtribe Carcharodina Verity, 1940. In the phylogenetic trees built from various genomic regions, these species form 7 (not 4) groups that we treat as genera. We find that Muschampia Tutt, 1906 is not monophyletic, and the 5th group is formed by currently monotypic genus Favria Tutt, 1906 new status (type species Hesperia cribrellum Eversmann, 1841), which is sister to Gomalia. The 6th and 7th groups are composed of mostly African species presently placed in Spialia. These groups do not have names and are described here as Ernsta Grishin, gen. n. (type species Pyrgus colotes Druce, 1875) and Agyllia Grishin, gen. n. (type species Pyrgus agylla Trimen, 1889). Two subgroups are recognized in Ernsta: the nominal subgenus and a new one: Delaga Grishin, subgen. n. (type species Pyrgus delagoae Trimen, 1898). Next, we observe that Carcharodus is not monophyletic, and species formerly placed in subgenera Reverdinus Ragusa, 1919 and Lavatheria Verity, 1940 are here transferred to Muschampia. Furthermore, due to differences in male genitalia or DNA sequences, we reinstate Gomalia albofasciata Moore, 1879 and Gomalia jeanneli (Picard, 1949) as species, not subspecies or synonyms of Gomalia elma (Trimen, 1862), and Spialia bifida (Higgins, 1924) as a species, not subspecies of Spialia zebra (Butler, 1888). Sequencing of the type specimens reveals 2.2-3.2% difference in COI barcodes, the evidence that combined with wing pattern differences suggests a new status of a species for Spialia lugens (Staudinger, 1886) and Spialia carnea (Reverdin, 1927), formerly subspecies of Spialia orbifer (Hübner, [1823]).

 

References

  1. Benyamini, D. (2005) Euphorbiaceae—a new host-plant family for Carcharodus alceae Esper, 1780 (Lepidoptera: Hesperiidae) and a discussion on the use of Euphorbiaceae by butterfly larvae (Papilionoidea, Hesperioidea) in the world. Nota lepidopterologica, 28, 75–92.

    Buchfink, B., Xie, C. & Huson, D.H. (2015) Fast and sensitive protein alignment using DIAMOND. Nature Methods, 12, 59–60.

    https://doi.org/10.1038/nmeth.3176

    Cock, M.J. (2016) Observations on the biology of Afrotropical Hesperiidae (Lepidoptera) with particular reference to Kenya. Part 10. Pyrginae, Carcharodini. Zootaxa, 4173 (4), 301–350.

    https://doi.org/10.11646/zootaxa.4173.4.1

    Cong, Q., Shen, J., Borek, D., Robbins, R.K., Opler, P.A., Otwinowski, Z. & Grishin, N.V. (2017) When COI barcodes deceive: complete genomes reveal introgression in hairstreaks. Proceedings of the Royal Society B: Biological Sciences, 284, 20161735.

    https://doi.org/10.1098/rspb.2016.1735

    Coutsis, J.G. (2016) The male and female genital structures of skippers currently placed in the genus Carcharodus Hübner, [1819] and their taxonomic significance (Lepidoptera: Hesperiidae, Pyrginae). Phegea, 44, 66–75.

    de Jong, R. (1974a) Notes on the genus Carcharodus (Lepidoptera, Hesperiidae). Zoologische Mededelingen, 48, 1–9.

    de Jong, R. (1974b) Systematics and evolution of palaearctic Spialia species. Tijdschrift voor entomologie, 117, 225–271.

    de Jong, R. (1977) Problems about Spiala ploetzi (Aurivillius) (Lepidoptera, Hesperiidae). Entomologische Berichten. Amsterdam, 37, 41–44.

    de Jong, R. (1978) Monograph of the genus Spialia Swinhoe (Lepidoptera, Hesperiidae). Tijdschrift voor entomologie, 121, 23–146.

    Devyatkin, A.L. (1991) Review of skippers of the genus Carcharodus Hbn. (Lepidoptera, Hesperiidae) of the USSR. Entomological Review, 70, 82–98.

    Evans, W.H. (1937) A catalogue of the African Hesperiidae indicating the classification and nomenclature adopted in the British Museum. British Museum (Natural History), London, xii + 212 pp., 230 pls.

    Evans, W.H. (1949) A catalogue of the Hesperiidae from Europe, Asia, and Australia in the British Museum (Natural History). British Museum (Natural History), London, xix + 502 pp., 553 pls.

    https://doi.org/10.5962/bhl.title.105941

    Evans, W.H. (1953) A catalogue of the American Hesperiidae indicating the classification and nomenclature adopted in the British Museum (Natural History). Part III. Pyrginae. Section 2. British Museum (Natural History), London, v + 246 pp., pls. 226–253.

    Guindon, S., Dufayard, J.F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology, 59, 307–321.

    https://doi.org/10.1093/sysbio/syq010

    Heliconius Genome Consortium (2012) Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature, 487, 94–98.

    https://doi.org/10.1038/nature11041

    Henning, G.A., Henning, S.F., Joannou, J.G. & Woodhall, S.E. (1997) Living Butterflies of Southern Africa. Volume I, Hesperiidae, Papilionidae and Pierida of South Africa. Umdaus Press, Hatfield, 397 pp.

    Hernandez-Roldan, J.L., Dapporto, L., Dinca, V., Vicente, J.C., Hornett, E.A., Sichova, J., Lukhtanov, V.A., Talavera, G. & Vila, R. (2016) Integrative analyses unveil speciation linked to host plant shift in Spialia butterflies. Molecular Ecology, 25, 4267–4284.

    https://doi.org/10.1111/mec.13756

    Kozlov, A., Darriba, D., Flouri, T., Morel, B. & Stamatakis, A. (2018) RAxML-NG: A fast, scalable, and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics, 35, 4453–4455.

    https://doi.org/10.1093/bioinformatics/btz305

    Larsen, T.B. (1991) The Butterflies of Kenya : And Their Natural History. Oxford University Press, Oxford, 522 pp.

    Li, W., Cong, Q., Shen, J., Zhang, J., Hallwachs, W., Janzen, D.H. & Grishin, N.V. (2019) Genomes of skipper butterflies reveal extensive convergence of wing patterns. Proc Natl Acad Sci U S A, 116, 6232–6237.

    https://doi.org/10.1073/pnas.1821304116

    Shen, J., Cong, Q., Borek, D., Otwinowski, Z. & Grishin, N.V. (2017) Complete genome of Achalarus lyciades, the first representative of the Eudaminae subfamily of skippers. Current Genomics, 18, 366–374.

    https://doi.org/10.2174/1389202918666170426113315

    Talavera, G., Lukhtanov, V.A., Pierce, N.E. & Vila, R. (2012) Establishing criteria for higher-level classification using molecular data: the systematics of Polyommatus blue butterflies (Lepidoptera, Lycaenidae). Cladistics, 29, 166–192.

    https://doi.org/10.1111/j.1096-0031.2012.00421.x

    Tuzov, V.K. (1997) Guide to the Butterflies of Russia and adjacent Territories. Vol. 1. Hesperiidae, Papilionidae, Pieridae, Satyridae. Pensoft, Sofia, 480 pp.

    Warren, A.D., Ogawa, J.R. & Brower, A.V.Z. (2008) Phylogenetic relationships of subfamilies and circumscription of tribes in the family Hesperiidae (Lepidoptera: Hesperioidea). Cladistics, 24, 642–676.

    https://doi.org/10.1111/j.1096-0031.2008.00218.x

    Warren, A.D., Ogawa, J.R. & Brower, A.V.Z. (2009) Revised classification of the family Hesperiidae (Lepidoptera: Hesperioidea) based on combined molecular and morphological data. Systematic Entomology, 34, 467–523.

    https://doi.org/10.1111/j.1365-3113.2008.00463.x

    Zhdanko, A.B. (1992) [A new skipper species of the genus Spialia Swinh. (Lepidoptera, Hesperiidae) from Kazakhstan]. Proceedings of the Zoological Institute, Russian Academy of Sciences, 248, 184–186. [in Russian]