Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2018-06-11
Page range: 161–173
Abstract views: 73
PDF downloaded: 4

Morphological and molecular characterization of Hemicycliophora subbotini n. sp. (Tylenchida: Hemicycliophoridae) from China

Labrotory of Plant Nematology, Institute of Biotechnology, College of Agriculture & Biotechnology, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China.
Labrotory of Plant Nematology, Institute of Biotechnology, College of Agriculture & Biotechnology, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China.
Labrotory of Plant Nematology, Institute of Biotechnology, College of Agriculture & Biotechnology, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China.
Institute for Sustainable Agriculture (IAS), Spanish National Research Council (CSIC), Campus de Excelencia Internacional Agroalimentario, ceiA3, Avenida Menéndez Pidal s/n, 14004 Córdoba, Spain.
Labrotory of Plant Nematology, Institute of Biotechnology, College of Agriculture & Biotechnology, Zhejiang University, Hangzhou 310058, Zhejiang, P. R. China. Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Hangzhou 310058, P. R. China.
Nematoda Cinnamomum camphora 18S D2–D3 ITS morphology morphometrics new species phylogeny SEM taxonomy

Abstract

Sheath nematodes of the genus Hemicycliophora are migratory root-ectoparasites of many crops, but the damage is documented for only a few species. Hemicycliophora subbotini n. sp., isolated in Hangzhou, Zhejiang, China, from the rhizosphere of camphor tree (Cinnamomum camphora (L.) Presl), is described and characterized morphologically and molecularly with important morphological details elucidated by SEM studies. The new species can be characterized by the conoid lip region, with bulging oral disc protruding beyond the first annulus in some specimens. Oral disc narrow ovate, amphidial apertures covered by lateral plates, lying in the same plane as oral disc when observed en face. Stylet 118 (108–125) μm long and flexible, stylet knobs concave shaped having a slight cavity. The excretory pore is located 1–2 annuli posterior to the base of pharyngeal bulb. Vulval lips slightly modified with small vulval sleeve, spermatheca rounded to oblong. Anus located 18 (15–22) annuli posterior to vulva. Tail elongated, with conoid or slightly offset spike having a narrowly rounded terminus. The study provides the first description of a new Hemicycliophora species from China. Phylogenetic analyses based on D2–D3 expansion segments of the 28S and ITS fragments revealed the new species forming a separate clade from other Hemicycliophora species which supported the status as a new species of this genus.

 

References

  1. Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution, 17, 540–552.
    https://doi.org/10.1093/oxfordjournals.molbev.a026334

    Chen, H.P., Yang, K., You C.X., Lei, N., Sun, R.Q., Geng, Z.F., Ma, P., Cai, Q., Du, S.S. & Deng, Z.W. (2014) Chemical constituents and insecticidal activities of the essential oil of Cinnamomum camphora leaves against Lasioderma serricorne. Journal of Chemistry, 2014, 1–5.
    https://doi.org/10.1155/2014/963729

    Chitambar, J.J & Subbotin, S.A. (2014) Systematics of the sheath nematodes of the superfamily Hemicycliophoroidea. In: Nematology Monograph and Perspectives. Vol. 10. Brill Publishers, Leiden, pp. 1–732.

    Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods, 9, 772.
    https://doi.org/10.1038/nmeth.2109

    De Grisse, A.T. (1969) Redescription ou modification de quelques techniques utilisées dans l’étude des nematodes phytoparasitaires. Mededelingen van de Rijksfaculteit der Landbouwwetenschappen Gent, 34, 351–369.

    De Ley, P., Félix, M.A., Frisse, L.M., Nadler, S.A., Sternberg, P.W. & Thomas, W.K. (1999) Molecular and morphological characterization of two reproductively isolated species with mirror-image anatomy (Nematoda: Cephalobidae). Nematology, 1, 591–612.
    https://doi.org/10.1163/156854199508559

    Doucet, M.E. (1982) Quatre nouvelles especes du genre Hemicycliophora De Man, 1921 (Nematoda: Tylenchida) provenant d’Argentine. Revue de Nématologie, 5, 309–320.

    Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98NT. Nucleic Acids Symposium Serial, 41, 95–98.

    Jenkins, W.R. (1964) A rapid centrifugal-flotation technique for separating nematodes from soil. Plant Disease Reporters, 48, 692.

    Jenkins, W.R., & Reed, J.P. (1964) Two new species of Hemicycliophora (Nematoda: Criconematidae) with a note on Hemicycliophora ritteri. Nematologica, 10, 111–115.
    https://doi.org/10.1163/187529264X00718

    Joyce, S., Reid, A., Driver, F. & Curran, J. (1994) Application of polymerase chain reaction (PCR) methods to identification of entomopathogenic nematodes. In: Burnell, A.M., Ehlers, R.U. & Masson, J.P. (Eds.), COST 812 Biotechnology: Genetics of Entomopathogenic Nematode-bacterium Complexes Proceedings of Symposium & Workshop, St. Patrick’s College, Maynooth, County Kildare and European Commission, DG, Luxembourg, pp. XII + 178–187.

    Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment 542 software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30, 772–780.
    https://doi.org/10.1093/molbev/mst010

    Li, X.W., Li, J. & Van der Werff, A. (2008) Cinnamomum Schaeffer. In: Wu, Z.Y., Raven, P. (Eds.), Flora of China. Vol. 7. Science Press, St. Louis, pp. 166–187.

    Loof, P.A.A. (1968) Taxonomy of Hemicycliophora species from west and central Europe (Nematoda: Criconematoidea). Mededelingen Landbouwhogeschool Wageningen, 68, 1–43.

    Man, J.G. de (1921) Nouvelles recherches sur les nématodes libres terricoles de la Hollande. Capita Zoologica, 1, 3–62.

    Monteiro, A.R. & Lordello, L.G.E. (1978) A description of Hemicycliophora poranga n. sp. from Brazil (Nemata). Revista Brasileira de Biologia, 38, 569–571.

    Maria, M., Cai, R., Castillo, P. & Zheng, J. (2018) Morphological and molecular characterization of Hemicriconemoides paracamelliae sp. n. (Nematoda: Criconematidae) and two known species of Hemicriconemoides from China. Nematology, 20. [published online]

    https://doi.org/ 10.1163/15685411-00003147

    Olson, M., Harris, T., Higgins, R., Mullin, P., Powers, K., Olson, S. & Powers, T.O. (2017) Species delimitation and description of Mesocriconema nebraskense n. sp. (Nematoda: Criconematidae), a morphologically cryptic, parthenogenetic species from North American Grasslands. Journal of Nematology, 49, 42–66.
    https://doi.org/10.21307/jofnem-2017-045

    Powers, T.O., Harris, T., Higgins, R., Sutton, L. & Powers, K.S. (2010) Morphological and molecular characterization of Discocriconemella inarata, an endemic nematode from North American native tallgrass prairies. Journal of Nematology, 42, 35–45.

    Raski, D.J. (1958) Four new species of Hemicycliophora de Man, 1921, with further observations on H. brevis Thorne, 1955 (Nematoda: Criconematidae). Proceedings of the Helminthological Society of Washington, 25, 125–131.

    Reed, J.P. & Jenkins, W.R. (1963) Hemicycliophora vaccinium n. sp. (Nematoda: Criconematidae) from cranberry. Proceedings of the Helminthological Society of Washington, 30, 211–212.

    Ronquist, F. & Huelsenbeck, J.P. (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572–1574.
    https://doi.org/10.1093/bioinformatics/btg180

    Seinhorst, J.W. (1959) A rapid method for the transfer of nematodes from fixative to anhydrous glycerin. Nematologica, 4, 67–69.
    https://doi.org/10.1163/187529259X00381

    Shi, Y., Chen, F., Ye, J, Fang, G. & Pan, H. (2012) Classification of parasitic nematodes in pine trees in China. Journal of Nanjing Forestry University, 36, 137–141. [in Chinese]

    Siddiqi M.R. (2000) Tylenchida parasites of plants and insects. 2nd Edition. CABI Publishing Wallingford, 848 pp.
    https://doi.org/10.1079/9780851992020.0000

    Subbotin, S.A., Chitambar, J.J., Chizhov, V.N., Stanley, J.D., Inserra, R.N., Doucet, M.E., McClure, M., Ye, W., Yeates, G.W., Mollov, D.S., Cantalapiedra-Navarrete, C., Vovlas, N., Van Den Berg, E. & Castillo, P. (2014) Molecular phylogeny, diagnostics, and diversity of plant-parasitic nematodes of the genus Hemicycliophora (Nematoda: Hemicycliophoridae). Zoological Journal of the Linnean Society, 171, 475–506.
    https://doi.org/10.1111/zoj.12145

    Tarjan, A.C. (1952) The nematode genus Hemicycliophora De Man, 1921 (Criconematidae) with a description of a new plant-parasitic species. Proceedings of the Helminthological Society of Washington, 19, 65–77.

    Thorne, G. (1955) Fifteen new species of the genus Hemicycliophora with an amended description of H. typical de Man (Tylenchida Criconematidae). Proceedings of the
    Helminthological Society of Washington
    , 22, 1–16.

    Van den Berg, E. (1981) Further studies on the genus Hemicycliophora de Man, 1921 in South Africa (Nematoda: Hemicycliophoroidea) with description of a new species. Phytophylactica, 13, 181–194.

    Van den Berg, E., Tiedt, L.R., Liebanas, G., Chitambar, J.J., Stanley, J.D., Inserra, R.N., Castillo, P. & Subbotin, S.A. (2018) Morphological and molecular characterization of two new Hemicycliophora species (Tylenchida: Hemicycliophoridae) with a revision of the taxonomic status of some known species and a phylogeny of the genus. Nematology, 20, 319–354.
    https://doi.org/10.1163/15685411-00003143

    Ye, W., Giblin-Davis, R.M., Braasch, H., Morris, K. & Thomas, W.K. (2007) Phylogenetic relationships among Bursaphelenchus species (Nematoda: Parasitaphelenchidae) inferred from nuclear ribosomal and mitochondrial DNA sequence data. Molecular Phylogenetics and Evolution, 43, 1185–1197.
    https://doi.org/10.1016/j.ympev.2007.02.006

    Zhang, X.K., Liang, W.J. Jiang, D.M., Liu, Z.M. & Jiang S. (2007). W. Soil nematode community structure in a Chinese sand dune system. Helminthologica, 44, 204–209. [in Chinese]
    https://doi.org/10.2478/s11687-007-0032-6

    Zheng, J., Subbotin, S.A., He, S., Gu, J. & Moens, M. (2003) Molecular characterization of some Asian isolates of Bursaphelenchus xylophilus and B. mucronatus using PCR-RFLPs and sequences of ribosomal DNA. Russian Journal of Nematology, 11, 17–22.