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Type: Articles
Published: 2011-08-12
Page range: 21–32
Abstract views: 64
PDF downloaded: 49

An integrative taxonomic approach to the identification of three new New Zealand endemic earthworm species (Acanthodrilidae, Octochaetidae: Oligochaeta)

Bio-Protection Research Centre, Lincoln University, New Zealand
National Museum of Science and Nature in Tokyo, Japan
Bio-Protection Research Centre, Lincoln University, New Zealand
Annelida Morphological description DNA barcoding phylogeny COI 16S rDNA

Abstract

This work adds three new species to the ca. 200 currently known from New Zealand. In Acanthodrilidae is Maoridrilus felix and in Octochaetidae are Deinodrilus gorgon and Octochaetus kenleei. All three are endemics that often have restricted ranges; however, little is yet known of their distribution, ecology nor conservation status. DNA barcoding was conducted, which is the first time that New Zealand endemic holotypes have been so characterized. The barcoding region COI (cytochrome c oxidase subunit 1) as well as the 16S rDNA region were sequenced using tissue from the holotype specimen to provide indisputable uniqueness of the species. These DNA sequences are publically available on GenBank to allow accurate cross checking to verify the identification of other specimens or even to identify specimens on the basis of their DNA sequences alone. Based on their 16S rDNA sequences, the position of the three newly described species in the phylogeny of New Zealand earthworms was discussed. The description of new species using this approach is encouraged, to provide a user-friendly identification tool for ecologists studying diverse endemic faunas of poorly known earthworm species.

References

  1. Blakemore, R.J. (2000) Tasmanian Earthworms with Review of World Families. CD-ROM Monograph, VermEcology, Canberra, Australia.

    Blakemore, R.J. (2002) Cosmopolitan Earthworms – an Eco-Taxonomic Guide to the Peregrine Species of the World. VermEcology, Kippax, ACT, Australia.

    Blakemore, R.J. (2004) Checklist of New Zealand Earthworms updated from Lee (1959). In: Moreno, A.G., Borges, S. (Eds.) Avances en taxonomia de lombrices de tierra / Advances in earthworm taxonomy (Annelida: Oligochaeta). Editorial Complutense, Universidad Complutense, Madrid, Spain, pp. 175–185.

    Blakemore, R.J., 2006. A review of New Zealand earthworms after Lee (1959). In: Kaneko, N. & Ito, M.T. (Eds.), A Series of Searchable Texts on Earthworm Biodiversity, Ecology and Systematics from Various Regions of the World. CD-ROM publication by Soil Ecology Research Group, Yokohama National University, Tokiwadai, Yokohama, Japan.

    Blakemore, R.J. (2008) Cosmopolitan earthworms – an Eco-Taxonomic Guide to the Species (3rd Edition). VermEcology, Yokohama, Japan.

    Blakemore, R.J., Kupriyanova, E.K. & Grygier, M.J. (2010) Neotypification of Drawida hattamimizu Hatai, 1930 (Annelida, Oligochaeta, Megadrili, Moniligastridae) as a model linking mt DNA (COI) sequences to an earthworm type, with a response to the ’Can of Worms’ theory of cryptic species. Zookeys, 41, 1–29.

    Boyer, S. & Wratten, S.D. (2010a). The potential of earthworms to restore ecosystem services after opencast mining - A review. Basic and Applied Ecology, 11, 196–203.

    Boyer, S. & Wratten, S.D. (2010b). Using molecular tools to identify New Zealand endemic earthworms in a mine restoration project (Oligochaeta: Acanthodrilidae, Lumbricidae, Megascolecidae). Zoology in the Middle East Supplementum, 2, 31–40.

    Brockie, R.E. & Moeed, A. (1986) Animal biomass in a New Zealand forest compared with other parts of the world. Oecologia, 70, 24–34.

    Chakrabarty, P. (2010) Genetypes: a concept to help integrate molecular phylogenetics and taxonomy. Zootaxa, 2632, 67–68.

    Chang, C.H. & Chen, J.H. (2005) Taxonomic status and intraspecific phylogeography of two sibling species of Metaphire (Oligochaeta : Megascolecidae) in Taiwan. Pedobiologia, 49, 591–600.

    Chang, C.H., Lin, S.M. & Chen, J.H. (2008) Molecular systematics and phylogeography of the gigantic earthworms of the Metaphire formosae species group (Clitellata, Megascolecidae). Molecular Phylogenetic and Evolution, 49, 958–968.

    Dayrat, B. (2005) Towards integrative taxonomy. Biological Journal Of The Linnean Society, 85, 407–415.

    Folmer, O., Black, M., Hoeh, W., Lutz, R., Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294–297.

    Hebert, P.D.N., Ratnasingham, S. & deWaard, J.R. (2003) Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proceedings of the Royal Society B: Biological Sciences, 270, S96–S99.

    Hitchmough, R., Bull, L. & Cromarty, P. (2007) New Zealand threat classification system lists. Science and Technical Publishing, Department of Conservation, Wellington, New Zealand.

    Huang, J., Xu, Q., Sun, Z.J., Tang, G.L. & Su, Z.Y. (2007) Identifying earthworms through DNA barcodes. Pedobiologia, 51, 301–309.

    King, R.A., Read, D.S., Traugott, M. & Symondson, W.O.C. (2008) Molecular analysis of predation: a review of best practice for DNA-based approaches. Molecular Ecology, 17, 947–963.

    Lee, K.E., Blakemore, R.J. & Fraser, P. (2000) Noke a Aotearoa - The Earthworms of New Zealand. The New Zealand Inventory of Biodiversity: A Species 2000 Symposium Review. Te Papa Museum, Wellington, New Zealand.

    Lee, K.E. (1959) The earthworm fauna of New Zealand. Department of Scientific and Industrial Research Bulletin 130, Wellington, New Zealand.

    Lee, K.E. (1985) Earthworms: their Ecology and Relationships with Soils and Plant Growth. Academic Press, Sydney, Australia.

    McGuiness, C.A. (2001) The conservation requirements of New Zealand's nationally threatened invertebrates. Department of Conservation, Wellington, New Zealand.

    Michaelsen, W. (1900) Das Tierreich. Vol. 10: Oligochaeta. Friedländer & Sohn, Berlin.

    Pop, A.A., Cech, G., Wink, M., Csuzdi, C. & Pop, V.V. (2007) Application of 16S, 18S rDNA and COI sequences in the molecular systematics of the earthworm family Lumbricidae (Annelida, Oligochaeta). European Journal of Soil Biology, 43, S43–S52.

    Pop, A.A., Wink, M. & Pop, V.V. (2003) Use of 18S, 16S rDNA and cytochrome C oxidase sequences in earthworm taxonomy (Oligochaeta, Lumbricidae). Pedobiologia, 47, 428–433.

    Richard, B., Decaens, T., Rougerie, R., James, S.W., Porco, D. & Hebert, P.D.N. (2010) Re-integrating earthworm juveniles into soil biodiversity studies: species identification through DNA barcoding. Molecular Ecology Resources,10, 606–614.

    Saitou N. & Nei M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406–425.

    Simon, C., Frati, F., Beckenbach, A., Crespi, B., Liu, H. & Flook, P. (1994) Evolution, weighting, and phylogenetic utility of mitochondrial gene-sequences and a compilation of conserved polymerase chain-reaction primers. Annals of the Entomological Society of America, 87, 651–701.

    Springett, J.A., Gray, R.A.J., Barker, D.J., Lambert, M.G., Mackay, A. & Thomas, V.J. (1998) Population density and distribution of the New Zealand indigenous earthworm Octochaetus multiporus (Megascolecidae : Oligochaeta) in hill pastures. New Zealand Journal of Ecology, 22, 87–93.

    Tamura K., Nei M. & Kumar S. (2004) Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences (USA), 101, 11030–11035.

    Tamura K., Dudley J., Nei M. & Kumar S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24, 1596–1599.

    Tautz, D., Arctander, P., Minelli, A., Thomas, R.H. & Vogler, A.P. (2003) A plea for DNA taxonomy. Trends in Ecology and Evolution, 18, 70–74.

    Yeates, G.W., Spiridonov, S.E. & Blakemore, R.J. (1998) Plesioungella kathleenae gen. n. et sp. n. (Nematoda: Drilonematoidea) from the Australian endemic megascolecid earthworm Fletcherodrilus unicus (Fletcher, 1889). New Zealand Journal of Zoology, 25, 205–212.