Skip to main content Skip to main navigation menu Skip to site footer
Type: Articles
Published: 2011-03-24
Page range: 29–40
Abstract views: 35
PDF downloaded: 1

Peninsular Malaysia’s first limbless lizard: a new species of skink of the genus Larutia (Böhme) from Pulau Pinang with a phylogeny of the genus

Department of Biology, La Sierra University, 4500 Riverwalk Parkway, Riverside, California, 92515-8247 USA Institute for Environment and Development (LESTARI), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor Darul Ehsan, Malaysia
School of Biological Sciences, Universiti Sains Malaysia, 11800 Minden, Penang, Malaysia
Department of Ecology and Evolutionary Biology and Biodiversity Institute, University of Kansas, Dyche Hall, 1345 Jayhawk Boulevard, Lawrence Kansas, 66045-7561, USA
Department of Biology, Villanova University, 800 Lancaster Avenue, Villanova, Pennsylvania 92108, USA
Department of Ecology and Evolutionary Biology and Biodiversity Institute, University of Kansas, Dyche Hall, 1345 Jayhawk Boulevard, Lawrence Kansas, 66045-7561, USA
School of Biological Sciences, Universiti Sains Malaysia, 11800 Minden, Penang, Malaysia
Institute for Environment and Development (LESTARI), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor Darul Ehsan, Malaysia
Reptilia Larutia Larutia penangensis Malaysia new species Penang Pulau Pinang Scincidae taxonomy phylogeny

Abstract

A new species of the scincid genus Larutia, L. penangensis sp. nov., from Pulau Pinang, Peninsular Malaysia is separated from all other congeners by having the unique characteristics of the complete absence of limbs, four supralabials, large body scales, and no banding or striping pattern. Additionally, it has the following unique combination of characters that further separates it from all congeners: a single presubocular; separated nasals; paired frontoparietals; small, widely separated prefrontals; no supranasals or postnasal; two postsupralabials; and large, posterior chinshields that contact the infralabials. A molecular phylogeny based on one mitochondrial and two nuclear genes from all species of Larutia from Peninsular Malaysia indicates L. penangensis sp. nov. is most basal and that L. seribuatensis is the sister lineage to a clade containing L. miodactyla and the sister species L. trifasciata and L. larutensis. Consistencies and inconsistencies between this phylogeny and a previously proposed morphological phylogeny are discussed.

References

  1. Cantor, T.E. (1847) Catalogue of retiles inhabiting the Malay Peninsula and islands, collected or observed by Theodore Cantor, Esq., M.D. Bengal Medical Services. Journal of the Asiatic Society of Bengal, 16, 607–656, 897–952, 1026–1078.

    Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792–97.

    Esselstyn, J.A., Garcia, H.J.D., Saulog, M.G. & Heaney, L.R. (2008) A new species of Desmalopex (Pteropodidae) from the Philippines, with a phylogenetic analysis of the Pteropodini. Journal of Mammalogy, 89, 815–825.

    Flower, S.S. (1896) Notes on a second collection of batrachians made in the Malay Peninsula 1895–96, with a list of the species recorded from that region. Proceedings of the Zoological Society of London, 1896, 856–914.

    Flower, S.S. (1899) Notes on a second collection of reptiles made in the Malay Peninsula and Siam. Proceedings of the Zoological Society of London, 1899, 600–696, 885–916.

    Greer, A.E. (1997) Leptoseps: a new genus of scincid lizards from Southeast Asia. Journal of Herpetology, 31, 393–398.

    Grismer, J.L., Leong, T.M. & Norsham, S.Y. (2003) Two new Southeast Asian skinks of the genus Larutia and intrageneric phylogenetic relationships. Herpetologica, 59, 554–566.

    Grismer, L.L. (2008) A revised and updated checklist of the lizards of Peninsular Malaysia. Zootaxa, 1860, 28–34.

    Grismer, L.L. (2011) The Lizards of Peninsular Malaysia and Singapore and the Adjacent Archipelagos. Their Distribution, Description, and Natural History. – Edition Chaimira, Frankfurt Main.

    Guindon, S. & Gascuel, O. (2003) A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biolology, 52, 696–704.

    Hillis, D.M., & Bull, J.J. (1993) An empirical tests of bootstrapping as a method for assessing confidence in phylogenetic analysis. Systematic Biology, 42, 182–192.

    Leviton, A.E., Anderson, S.C., Gibbs, R.H., Heal, E. & Dawson, C.E. (1985) Standards in herpetology and ichthyology. Part I. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. Copeia, 1985, 802–832.

    Lim, L. J. (1998) The taxonomy of West Malaysian and Singapore Scincidae (Reptilia: Sauria). Unpublished M.S. Thesis, National University of Singapore, Kent Ridge, Singapore, 234 pp.

    Posada, D. (In press) jModelTest: Phylogenetic Model Averaging. Molecular Biology and Evolution.

    Rambaut A. (2002) Se-Al: Sequence alignment editor, Version 2.0a11, available at http://tree.bio. ed.ac.uk/software/seal/

    Rambaut, A. & Drummond, A.J. (2007) Tracer v1.4, Available from http://beast.bio.ed.ac.uk/Tracer.

    Ronquist, F. & Huelsenbeck, J.P. (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572–1574.

    Siler, C.D., Diesmos, A.C., Alcala, A.C. & Brown, R.M. (in press) Phylogeny and biogeography of Philippine slender skinks (Scincidae: Brachymeles) reveal underestimated species diversity and cryptic patterns of lineage diversification. Molecular Phylogenetics and Evolution.

    Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688–2690.

    Stamatakis, A., Blagojevic, F., Nikolopoulos, D. & Antonopoulos, C. (2007) Exploring new search algorithms and hardware for phylogenetics: RAxML meets the IBM cell. J. VLSI Signal Processing 48, 271–286.

    Stoliczka, F. (1870) Observations on some Indian and Malayan Amphibia and Reptilia. Proceedings of the Asiatic Society of Bengal, 1870, 103–108.

    Stoliczka, F. (1870) Observations on some Indian and Malayan Amphibia and Reptilia. Journal of the Asiatic Society of Bengal, 39, 134–157.

    Stoliczka, F. (1870) Observations on some Indian and Malayan Amphibia and Reptilia. Journal of the Asiatic Society of Bengal, 39, 159–228.

    Stoliczka, F. (1873) Notes on some Malayan Amphibia and Reptilia. -Journal of the Asiatic Society of Bengal, 42, 111–126.

    Wilgenbusch, J.C., Warren, D.L. & Swofford, D.L. (2004) AWTY: A system for graphical exploration of MCMC convergence in Bayesian phylogenetic inference. http://ceb.csit.fsu.edu/awty.