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Issue: Vol. 4532 No. 2: 18 Dec. 2018
Type: Article
Published: 2018-12-18
DOI: 10.11646/zootaxa.4532.2.2
Page range: 203–230
Abstract views: 135
PDF downloaded: 2

A new species of Phyzelaphryne Heyer, 1977 (Anura: Eleutherodactylidae) from the Japurá River basin, with a discussion of the diversity and distribution of the genus

Laboratório de Sistemática de Vertebrados / Programa de Pós-Graduação em Zoologia, Escola de Ciências, Pontifícia Universidade Católica do Rio Grande do Sul, Av. Ipiranga 6681, Prédio 40, sala 110, 90619-900, Porto Alegre, Rio Grande do Sul, Brazil.
Laboratório de Herpetologia, Museu Paraense Emílio Goeldi / CZO, CP 399, Av. Perimetral, 1901, Terra Firme, 66077-530 Belém, Pará, Brazil.
Laboratório de Sistemática de Vertebrados / Programa de Pós-Graduação em Zoologia, Escola de Ciências, Pontifícia Universidade Católica do Rio Grande do Sul, Av. Ipiranga 6681, Prédio 40, sala 110, 90619-900, Porto Alegre, Rio Grande do Sul, Brazil.
Laboratório de Sistemática de Vertebrados / Programa de Pós-Graduação em Zoologia, Escola de Ciências, Pontifícia Universidade Católica do Rio Grande do Sul, Av. Ipiranga 6681, Prédio 40, sala 110, 90619-900, Porto Alegre, Rio Grande do Sul, Brazil.
Laboratório de Herpetologia, Museu Paraense Emílio Goeldi / CZO, CP 399, Av. Perimetral, 1901, Terra Firme, 66077-530 Belém, Pará, Brazil. Universidade Federal de São Paulo, Departamento de Ecologia e Biologia Evolutiva, Av. Professor Artur Riedel, 275, Jardim Eldorado, Diadema, CEP 09972-270, São Paulo, Brazil.
Laboratório de Herpetologia, Museu Paraense Emílio Goeldi / CZO, CP 399, Av. Perimetral, 1901, Terra Firme, 66077-530 Belém, Pará, Brazil. Universidade Federal do Pará, Instituto de Ciências Biológicas, R. Augusto Corrêa, 1, Guamá, Belém, 66075-110, Pará, Brazil.
Department of Herpetology, American Museum of Natural History, Central Park West & 79th St., New York, NY 10024, USA.
Amphibia Amazonia Brazil conservation units DNA barcoding morphology Phyzelaphryninae Terrarana

Abstract

We describe and name the second species of Phyzelaphryne (Brachycephaloidea, Eleutherodactylidae), from northwestern Brazilian Amazonia. Phyzelaphryne nimio sp. nov. is distinguished from its only congener, Phyzelaphryne miriamae, by its smaller body size and the anatomy of the carpal and metacarpal regions, with relatively larger (sometimes fused) supernumerary carpal and metacarpal tubercles. Molecular phylogenetic analyses based on fragments of the mitochondrial genes 16S rRNA and COI suggest that the currently known distribution of the species is restricted to its type locality and other areas within Estação Ecológica Juami-Japurá, state of Amazonas, Brazil. Based on molecular, morphological and bioacoustic evidence, we assigned other specimens recently collected in Parque Nacional do Jaú, state of Amazonas, Brazil, to P. miriamae, extending the species’ known geographic distribution north of the Amazon River.

 

References

  1. Andersson, L.G. (1945) Batrachians from East Ecuador, collected 1937, 1938 by Wm. Clarke-Macintyre and Rolf Blomberg. Arkiv för Zoologi. Stockholm, 37A (2), 1–88.

    Benson, D.A., Cavanaugh, M., Clark, K., Karsch-Mizrachi, I., Lipman, D.J., Ostell, J. & Sayers, E.W. (2013) GenBank. Nucleic Acids Research, 41, 36–42. [D36–D42]

    https://doi.org/10.1093/nar/gks119

    Bioacoustics Research Program (2011) Raven Pro: Interactive Sound Analysis Software. Version 1.4. The Cornell Lab of Ornithology, Ithaca, New York. [software]

    Brown, J.L., Twomey, E., Amézquita, A., Souza, M.B., Caldwell, J.P., Lötters, S., von May, R., Melo-Sampaio, P.R., Mejía-Vargas, D., Perez-Peña, P., Pepper, M., Poelman, E.H., Sanchez-Rodriguez, M. & Kyle Summers, K. (2011) A taxonomic revision of the Neotropical poison frog genus Ranitomeya (Amphibia: Dendrobatidae). Zootaxa, 3083, 1–120.

    Duellman, W.E & Lehr, E. (2009) Terrestrial-Breeding Frogs (Strabomantidae) in Peru. Natur und Tier—Verlag Gmbh, Münster, 382 pp.

    Farris, J.S., Albert, V.A., Källersjö, M., Lipscomb, D. & Kluge, A.G. (1996) Parsimony jackknifing outperforms neighbor- joining. Cladistics, 12, 99–124.

    https://doi.org/10.1111/j.1096-0031.1996.tb00196.x

    Fearnside, P.M. (2014) Impacts of Brazil’s Madeira River dams: Unlearned lessons for hydroelectric development in Amazonia. Environmental Science & Policy, 38, 164–172.

    https://doi.org/10.1016/j.envsci.2013.11.004

    Fearnside, P.M. (2015) Tropical hydropower in the clean development mechanism: Brazil’s Santo Antônio Dam as an example of the need for change. Climatic Change, 131, 575–589.

    https://doi.org/10.1007/s10584-015-1393-3

    Fearnside, P.M. & Graça, P.M.L.A. (2006) BR-319: Brazil’s Manaus-Porto Velho highway and the potential impact of linking the arc of deforestation to central Amazonia. Environmental Management, 38, 705–716.

    https://doi.org/10.1007/s00267-005-0295-y

    Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783–791.

    https://doi.org/10.1111/j.1558-5646.1985.tb00420.x

    Fouquet, A., Loebmann, D., Castroviejo-Fisher, S., Padial, J.M., Orrico, V.G.D., Lyra, M.L., Roberto, I.J., Kok, P.J.R, Haddad, C.F.B. & Rodrigues, M.T. (2012) From Amazonia to the Atlantic forest: Molecular phylogeny of Phyzelaphryninae frogs reveals unexpected diversity and a striking biogeographic pattern emphasizing conservation challenges. Molecular Phylogenetics and Evolution, 65 (2), 547–561.

    https://doi.org/10.1016/j.ympev.2012.07.012

    Frost, D. (2018) Amphibian Species of the World: an Online Reference. Version 6.0. American Museum of Natural History, New York. Available from: http://research.amnh.org/vz/herpetology/amphibia/ (accessed 17 May 2018).

    Goloboff, P.A., Farris, J.S. & Nixon, K.C. (2008) TNT, a free program for phylogenetic analysis. Cladistics, 24, 774–786.

    https://doi.org/10.1111/j.1096-0031.2008.00217.x

    Gonzalez-Voyer, A., Padial, J.M., Castroviejo-Fisher, S., De La Riva, I. & Vilà, C. (2011) Correlates of species richness in the largest Neotropical amphibian radiation. Journal of Evolutionary Biology, 24 (5), 931–942.

    https://doi.org/10.1111/j.1420-9101.2011.02243.x

    Hedges, S.B., Duellman, W.E. & Heinicke, M.P. (2008) New World direct-developing frogs (Anura: Terrarana): Molecular phylogeny, classification, biogeography, and conservation. Zootaxa, 1737, 1–182.

    Heinicke, M.P., Lemmon, A.R., Lemmon, E.M., McGrath, K. & Hedges, S.B. (2018) Phylogenomic support for evolutionary relationships of New World direct-developing frogs (Anura: Terraranae). Molecular Phylogenetics and Evolution, 118, 145–155.

    https://doi.org/10.1016/j.ympev.2017.09.021

    Heyer, W.R. (1977) Taxonomic notes on frogs from the Madeira and Purus rivers, Brasil. Papéis Avulsos de Zoologia, 31, 141–162.

    Hoogmoed, M.S. & Lescure, J. (1984) A new genus and two new species of minute leptodactylid frogs from northern South America, with comments upon Phyzelaphryne (Amphibia: Anura: Leptodactylidae). Zoologische Mededelingen Leiden, 58 (6), 85–11.

    Jungfer, K.H., Faivovich, J., Padial, J.M., Castroviejo-Fisher, S., Lyra, M.M., Berneck, B.V.M., Haddad, C.F.B., Iglesias, P.P., Kok, P.J.R., MacCulloch, R.D., Rodrigues, M.T., Verdade, V.K., Torres-Gastello, C.P., Chaparro, J.C., Valdujo, P.H., Reichle, S., Moravec, J., Gvoždík, V., Gagliardi-Urrutia, G., Ernst, R., De la Riva, I., Means, D.B., Lima, A.P., Señaris, J.C. & Wheeler, W.C. (2013) Systematics of spiny-backed treefrogs (Hylidae: Osteocephalus): An Amazonian puzzle. Zoologica Scripta, 42, 351–380.

    https://doi.org/10.1111/zsc.12015

    Katoh, K. & Standley, D.M. (2013) MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Molecular Biology and Evolution, 30 (4), 772–780.

    https://doi.org/10.1093/molbev/mst010

    Kearse, M., Moir, R., Wilson, A., Stones-havas, S., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C., Thierer, T., Ashton, B., Meintjes, P. & Drummond, A. (2012) Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics, 28, 1647–1649.

    https://doi.org/10.1093/bioinformatics/bts199

    Köhler, J., Jansen, M. Rodríguez, A., Kok, P.J.R., Toledo, L.F., Emmrich, M., Glaw, F., Haddad, C.F.B., Rödel, M. & Vences, M. (2017) The use of bioacoustics in anuran taxonomy: theory, terminology, methods and recommendations for best practice. Zootaxa, 4251 (1), 1–124.

    https://doi.org/10.11646/zootaxa.4251.1.1

    Kok, P.J.R. & Kalamandeen, M. (2008) Introduction to the taxonomy of the amphibians of Kaieteur National Park, Guyana. Abc Taxa, 5, 1–278.

    Kumar, S., Stecher, G. & Tamura, K. (2015) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33 (7), 1870–1874.

    https://doi.org/10.1093/molbev/msw054

    Lanfear, R., Calcott, B., Ho, S.Y. & Guindon, S. (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution, 29 (6), 1695–1701.

    https://doi.org/10.1093/molbev/mss020

    Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. (2016) PartitionFinder 2: new methods for selecting partitioned models of evolution formolecular and morphological phylogenetic analyses. Molecular Biology and Evolution, 34 (3), 772–773.

    https://doi.org/10.1093/molbev/msw260

    Lourenço-de-Moraes, R., Ferreira, R.B., Fouquet, A. & Bastos, R.P. (2014) A new diminutive frog species of Adelophryne (Amphibia: Anura: Eleutherodactylidae) from the Atlantic Forest, southeastern Brazil. Zootaxa, 3846 (3), 348–360.

    https://doi.org/10.11646/zootaxa.3846.3.2

    Lynch, J.D. (1980) A new species of Barycholos from Estado Goiás, Brasil (Amphibia, Anura, Leptodactylidae) with remarks on related genera. Bulletin du Museum National d'Histoire Naturelle, Paris, Section A, Zoologie, Biologie et Ecologie Animales, 2, 289–302.

    MacCulloch, R.D., Lathrop, A., Kok, P.J.R., Minter, L.R., Khan, S.Z. & Barrio-Amorós, C.L. (2008) A new species of Adelophryne (Anura: Eleutherodactylidae) from Guyana, with additional data on A. gutturosa. Zootaxa,1884, 36–50.

    Miller, M.A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, LA, 2010, 1–8.

    https://doi.org/10.1109/GCE.2010.5676129

    Padial, J.M., Grant, T. & Frost, D.R. (2014) Molecular systematics of terraranas (Anura: Brachycephaloidea) with an assessment of the effects of alignment and optimality criteria. Zootaxa, 3825 (1), 1–132.

    https://doi.org/10.11646/zootaxa.3825.1.1

    Palumbi, S.R. (1996) Nucleic acids II: the polymerase chain reaction. In: Hillis, D.M., Moritz, C. & Mable, B.K. (Eds.), Molecular Systematics. Sinauer & Associates Inc., Sunderland, Massachusetts, pp. 205–247.

    Peloso, P.L.V., Sturaro, M.J., Forlani, M.C., Gaucher, P., Motta, A.P. & Wheeler, W.C. (2014) Phylogeny, taxonomic revision, and character evolution of the genera Chiasmocleis and Syncope (Anura, Microhylidae) in Amazonia, with descriptions of three new species. Bulletin of the American Museum of Natural History, 386 (1), 1–112.

    https://doi.org/10.1206/834.1

    Peloso, P.L.V., Orrico, V.G.D., Haddad, C.F.B., Lima-Filho, G.R. & Sturaro, M.J. (2016) A new species of clown tree frog, Dendropsophus leucophyllatus Species Group, from Amazonia (Anura, Hylidae). South American Journal of Herpetology, 11 (1), 66–80.

    https://doi.org/10.2994/SAJH-D-16-00003.1

    Real Academia Española (2014) Diccionario de la lengua española. 23th Edition. Available from: http://dle.rae.es (accessed 16 January 2017)

    Simões, P.I. (2016) A new species of nurse-frog (Aromobatidae) from the Madeira River basin with a small geographic range. Zootaxa, 4083 (4), 501–525.

    https://doi.org/10.11646/zootaxa.4083.4.3

    Trancoso, R., Carneiro Filho, A., Tomasella, J., Schietti, J., Forsberg, B.R. & Miller, R.P. (2009) Deforestation and conservation in major watersheds of the Brazilian Amazon. Environmental Conservation, 36, 277–288.

    https://doi.org/10.1017/S0376892909990373

    Vaidya, G., Lohman, D.J. & Meier, R. (2011) SequenceMatrix: concatenation software for the fast assembly of multi‐gene datasets with character set and codon information. Cladistics, 27, 171–180.
    https://doi.org/10.1111/j.1096-0031.2010.00329.x

    Vences, M., Thomas, M., Bonett, R.M. & Vieites, D.R. (2005) Deciphering amphibian diversity through DNA barcoding: chances and challenges. Philosophical Transactions of the Royal Society B: Biological Sciences, 360 (1462), 1859–1868.

    https://doi.org/10.1098/rstb.2005.1717

    Zwickl, D.J. (2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph.D. dissertation. The University of Texas at Austin, Austin, Texas.