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Type: Correspondence
Published: 2020-01-31
Page range: 59–62
Abstract views: 784
PDF downloaded: 458

Old and new challenges in taxonomy: what are taxonomists up against?

CeNak, Hamburg University
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NADINE DUPÉRRÉ

Arachnology, collection manager
COI barcoding description diagnosis species Natural history Museum

Abstract

 

Old and new challenges in taxonomy: 1. How is alpha taxonomy coping with Natural History Museum staff and funding shortages? 2. Is alpha taxonomy being falsely portrayed as: the tedious, painstaking, time-consuming labour, the none-accessible, old-fashioned science? 3. How will taxonomists face the trend of naming species based on DNA without morphological diagnosis or description?

References

  1. Andreone F., Bartolozzi, L., Boana, G., Boero, F. Bologna, M.A., Bon, M., Bressi, N., Capula, M., Casala, A., Casiraghi, M. Chiozzi, G., Delfino, M., Doria, G., Durante, A., Ferrari, M., Gippoliti, S., Lanzinger, M., Latella, L., Maio, N., Mrangoni, C., Mazzotti, S., Minelli, A., Muscio, G., Nicolosi, P., Pievani, T., Razzetti, E., Sabella, G., Valle, M., Vomero, V. & Zilli, A. (2014) Italian natural history museums on the verge of collapse ? Zookeys, 456, 139–146.

    https://doi.org/10.3897/zookeys.456.8862

    Beng, K.C., Tomlinson, K.W., Shen, X.H., Surget-Groba, Y., Hugher, A.C., Corlett, R.T. & Slik, J.W.F. (2016) The utility of DNA metabarcoding for studying the response of arthropod diversity and composition to land-use change in the tropics. Nature, Scientific reports, 6 (24965), 1–13.

    https://doi.org/10.1038/srep24965

    Brown, W.L., Jr. & Wilson E.O. (1956) Character displacement. Systematic Zoology, 5, 49–64.

    Bourne, W.R.P. (1988) Cuts at the British Museum (NH). Nature, vol. 333, 26 May 1988, p. 292.

    Buhay, J.E. (2009) “COI-LIKE” sequences are becoming problematic in molecular systematic and DNA Barcoding studies. Journal of crustacean biology, 29 (1), 96–110.

    https://doi.org/10.1651/08-3020.1

    Carew M.A., Pettigrove, V.J., Metzeling & Hoffmann, A.A.L. (2013) Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicatot species. Frontiers in Zoology, 10 (1) 45, 1–15.

    https://doi.org/10.1186/1742-9994-10-45

    Cifelli, R.L. & Kilean-Jaworowska, Z. (2005) Diagnosis: Differing interpretations of the ICZN. Acta Palaeontological Polonica, 50 (3), 650–652.

    Cong, Q., Shen, J., Borek, D., Robbins, R.K., Opler, P.A., Otwinowski, Z., & Grishin, N.V. (2017) When CO1 barcodes deceive: complete genomes reveal introgression in hairstreaks. Proceeding of the Royal Society, B, 284, 20161735, 1–9. http://dx.doi.org/10.1098/rspb.2016.1735

    Dalton, R. (2003) Natural history collections in crisis as funding is slashed. Nature, 423, 575.

    https://doi.org/10.1038/423575a

    Herbert, P.D.N., Cywinska A., Shelley L. Ball & de Waard J.R. (2003) Biological identifications through DNA barcodes. Proceedings of the royal society B, 270, 1512, 313–321.

    https://doi.org/10.1098/rspb.2002.2218

    ICZN (2019) International Commission on Zoological Nomenclature. International Code of Zoological Nomenclature. Available from: https://www.iczn.org/the-code/the-international-code-of-zoological-nomenclature/the-code-online/ (Accessed 30 December 2019)

    Laskow, S. (2017) It’s Hard to Be a Natural History Museum in the 21st Century. As belts tighten, rich collections of plant and animal specimens face relegation, dissolution, or worse. Available from: https://www.atlasobscura.com/articles/natural-history-museums-closing-survival-modernizing (Accessed 1 December 2019)

    Lopardo, L. & Uhl, G. (2014) Testing mitochondrial marker efficacy for DNA barcoding in spiders: attest case using the dwarf spider genus Oedothorax (Araneae: Linyphiidae: Erigoninae). Invertebrate Systematics, 28, 501–521.

    http://dx.doi.org/10.1071/IS14017

    Marshall, E. (2005) Will DNA Bar Codes Breathe Life into Classification? Science, 307, 1037.

    https://doi.org/10.1126/science.307.5712.1037

    Matthew, H.D. (2010) Alpha taxonomy—a dead science? Available from: https://www.sci.hokudai.ac.jp/~mhdick/dick/page3/page3.html (Accessed 12 January 2020).

    Potapov, V. & Ong, J.L. (2017) Correction: Examining Sources of Error in PCR by Single-Molecule Sequencing. PLOS ONE 12,7, e0181128.

    https://doi.org/10.1371/journal.pone.0181128

    Pinheiro, H.T., Moreau, C.S, Daly, M. & Rocha, L.A. (2019) Will DNA barcoding meet taxonomic needs? Science, 365 (6456), 873–874.

    https://doi.org/10.1126/science.aay7174

    Renner, S.S. (2016) A Return to Linnaeus´s Focus on Diagnosis, Not Description the use of DNA characters in the formal naming of species. Systematics Biology, 65, 6, 1085–1095.

    https://doi.org/10.1093/sysbio/syw032

    Riedel, A., Sagata K., Suhardjono Y.K., Tänzler, R. & Balke, M. (2013) Integrative taxonomy on fast track -towards more sustainability in biodiversity research. Frontiers in Zoology 2013, 10–15.

    https://doi.org/10.1186/1742-9994-10-15

    Shen, H. (2012) Nature.com. Chicago’s Field Museum cuts back on science. Available from: https://www.nature.com/news/chicago-s-field-museum-cuts-back-on-science-1.12105 (Access 1 December 2019).

    https://doi.org/10.1038/nature.2012.12105

    Stearn, W.T. (1992) Botanical Latin: history, grammar, syntax, terminology and vocabulary. 4th ed., Timber Press, Portland, Oregon, 546 pp.

    Ward, P.S. (2007) Edward O. Wilson and his contributions to ant systematics. In: Snelling, R. R., B. L. Fisher, and P. S. Ward (Eds), Advances in ant systematics (Hymenoptera: Formicidae): homage to E. O. Wilson—50 years of contributions. Memoirs of the American Entomological Institute, Philadelphia, 80, pp. 3–7.

    Wheeler, Q.D., Knapp, S., Stevenson, D.W., Stevenson, J., Blum, S.D., Boom, B.M, Borisy, G.G., Buizer, J.L., De Carvalho, M.R., Cibrian, A., Donoghue, M.J., Doyle, V., Gerson, E.M., Graham, C.H., Graves, P., Graves, S.J., Guralnick, R.P., Hamilton, A.L., Hanken, J., Law, W., Lipscomb, D.L., Lovejoy, T.E., Miller, H., Miller, J.S., Naeem, S., Novacek, M.J., Page, L.M., Platnick, N.I., Porter-Morgan, H., Raven, P.H., Solis, M.A., Valdecasas, A.G., Van Der Leeuw, S., Vasco, A., Vermeulen, N., Vogel, J., Walls, L., Wilson, E.O., Woolley, J.B. (2012) Mapping the biosphere: exploring species to understand the origin, organization and sustainability of biodiversity. Systematics and Biodiversity, 10, 1–20.

    https://doi.org/10.1080/14772000.2012.665095

    Wilson, E.O. (1955) A monographic revision of the ant genus Lasius. Bulletin of the Museum of Comparative Zoology, 113, 1–201.

    Yong, E. (2016) The Atlantic. Funding Freeze Hits Natural History Museum Collections. Available from: https://www.theatlantic.com/science/archive/2016/03/funding-freeze-hits-natural-history-museum-collections/474981/ (Accessed 1 December 2019).

    Zamudio, K.R., Kellner, A., Serejo, C., Ribero de Britto, M., Castro, C.B., Buckup P.A., Pires, D.O., Couri, M., Brilhante Kury, A., Azevedo Cardoso, I., Monné, M.L., Pombal Jr., J., Mello Patiu, C., Padula, V., Dias Piementa, A., Rezende Ventura, C.R., Hajdu, E., Zanol, J., Bruna, E.M., Fitzpatrick J. & Rocha, L.A. (2018) Lack of science supports fails Brazil. Science 361, 1322.

    https://doi.org/10.1126/science.aav3296

    Zimmerman, J., Glöcjner, G., Jahn, R., Enke, N. & Gemeinholzer, B. (2015) Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies. Molecular Ecology Resources 15, 526–542.

    https://doi.org/10.1111/1755-0998.12336