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Type: Articles
Published: 2012-01-04
Page range: 59–68
Abstract views: 28
PDF downloaded: 18

The phylogenetic relationships of Paramesotriton (Caudata: Salamandridae) based on partial mitochondrial DNA gene sequences

School of Life Sciences, Guizhou Normal University, 116 N Baoshan Rd, Guiyang, Guizhou, China 550001
School of Life Sciences, Guizhou Normal University, 116 N Baoshan Rd, Guiyang, Guizhou, China 550001
Molecular Biology Unit of King’s College London, London, UK
Department of Biology, Liupanshui Normal College, Shuicheng, Guizhou China 553004
Department of Biology, Liupanshui Normal College, Shuicheng, Guizhou China 553004
Amphibia Mitochondrial DNA sequences Phylogeny Paramesotriton

Abstract

We examined phylogenetic relationships among newst of the genus Paramesotriton using partial mitochondrial gene se-quences, including the ND2-tRNATyr region (1415 bp) and the 12S rDNA-tRNAVal -16S rDNA region (1774 bp), from 42individuals of 10 recognized Paramesotriton species and outgroups by Bayesian inference (BI), Maximum likelihood(ML) and Maximum Parsimony (MP) methods. We found that, (1) Laotriton laoensis is the sister group of Paramesotri-ton, (2) the genus Paramesotriton is monophyletic, composed of either the P. caudopunctatus species group and the P.chinensis species group, or the subgenera Allomesotriton and Paramesotriton (3) P. longliensis and P. zhijinensis shouldbe placed in the P. caudopunctatus species group or subgenus Allomesotriton; (4) P. fuzhongensis is not a junior synonym of P. chinensis, and there is a close phylogenetic relationship between P. fuzhongensis and P. guangxiensis.

References

  1. Altekar, G., Dwarkadas, S., Huelsenbeck, J.P. & Ronquist, F. (2004) Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference. Bioinformatics, 20, 407–415.

    Amphibiaweb. www.amphibiaweb.org

    Chan, L.M., Zamudio, K.R & Wake, D.B. (2001) Relationships of the salamandrid genera Paramesotriton, Pachytriton, and Cynops based on mitochondrial DNA sequences. Copeia, 997–1009.

    Dubois, A & Raffaelli, J. (2009) A new ergotaxonomy of the family Salamandridae Goldfuss, 1820 (Amphibia, Urodela). Alytes, 26 (1–4), 1–85.

    Fei, L., Hu S. Q., Ye, C.Y. & Huang Y.Z. (2006) Fauna Sinica.Amphibia V01.1.General accounts of Amphibia, Gymnophiona and Urodela. Science Press, Beijing, China, pp. 253–313. (in Chinese)

    Farris, J.S., Kallersjo, M., Kluge, A.J. & Bult, C. (1995)Constructing a significance test for incongruence. Systematic Biology, 44, 570–572.

    Frost, D., R. (2011) Amphibian Species of the World: an Online Reference. Version 5.5 (31 January, 2011). Electronic Database accessible at http://research.amnh.org/vz/herpetology/amphibia/American Museum of Natural History, New York, USA.

    Freytag, G.E. (1983) Zur systematischen Stellung von Trituroides caudopunctatus (Liu & Hu, 1973). Morphometrische und röntgenanatomische Befunde (Amphibia, Caudata, Salamandridae). Zoologische Abhandlungen Staatliches Museum für Tierkunde in Dresden, 39 (2), 39–49.

    Frost, D.R. (2011) Amphibian Species of the World: an Online Reference. Version 5.5 (31 January, 2011). Electronic Database accessible at http://research.amnh.org/vz/herpetology/amphibia/ American Museum of Natural History, New York, USA.

    Kishino, H. & Hasegawa, M. (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. Journal of Molecular Evolution, 29, 170–179.

    Li ,S., Tian Y.Z & Gu, X.M. ( 2008) A New Species of Paramesotriton the genus (Caudata: Salamandridae). Acta Zootaxonomica Sinica, 33(2), 410–413. (in Chinese)

    Li, S., Tian, Y.Z., Gu, X.M & Xiong, R.C. (2008) A New Species of Paramesotriton Paramesotriton longliensis (Caudata: Salamandridae).Zoological Research, 29(3), 313–317. (in Chinese)

    Lu, S.Q., Yuan, Z.G., Pang, J.F., Yang, D.T., Yu, F.H., McGuire, P., Xie, F. & Zhang, Y.P. (2004) Molecular phylogeny of the genus Paramesotriton (Caudata: Salamandridae). Biochemical Genetics, 42, 139–148.

    Macey, J.R & Larson A., Ananjeva, N.B., Papenfuss ,T.J. (1997) Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards. Molecular Phylogenetics and Evolution, 44, 660–674.

    Pang, J.Q., Jiang, Y.M & Hu, Q.X. (1992) A systematic study on the Chinese newt genus Paramesotriton (Caudata: Salamandridae). In: Collected Papers on Herpetology, Jiang, Y. (ed.). Sichuan Science and Technology Publishing House, Chengdu, China, pp. 89–100. (in Chinese)

    R affaëlli, J. (2007) Les Urodèlesdu monde. Plumelec Penclen édition: [i-vi] + 1~377.

    Ronquist, P.R & Huelsenbeck, J.P. ( 2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572–1574.

    Shimodaira, H., Hasegawa, M. (2001) CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics, 17, 1246–1247.

    Shimodaira, H. (2002) An approximately unbiased test of phylogenetic tree selection. Systematic Biology, 51, 492–508.

    Sparreboom, M. (1983) On the sexual behaviour of Paramesotriton caudopunctatus (Liu and Hu) (Amphibia, Caudata, Salamandridae). Amphidia Reptilia, 4, 25–33.

    Steinfartz, S., Vicario, S., Arntzen, J.W & Caccone, A. (2007) A Bayesian Approach on Molecules and Behavior:Reconsidering Phylogenetic and Evolutionary Patterns of the Salamandridae with Emphasis on Triturus Newts. Journal of Experimental Zoology, 308B, 139–142.

    Stuart, B.L. & Papenfuss, T.J. (2002) A new salamander of the genus Paramesotriton (Caudata: Salamandridae) from Laos. Journal of Herpetology, 36, 145–148.

    Swofford, D.L. (2003) PAUP: Phylogenetic Analysis Using Parsimony (and Other Methods).Version 4 0b10 Sinauer Associates, Sunderland, MA.

    Templeton, A.R.(1983) Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution, 37, 221–244.

    Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F & Higgins, D.G. (1997) The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24, 4876–4882.

    Titus, T.A. & Larson, A. (1995) A molecular phylogenetic perspective on the evolutionary radiation of the salamander family Salamandridae. Systematic Biology, 44, 125–151.

    Weisrock, D.W., Papenfuss, T. J., Macey, J. R., Litvinchuk, S. N, Polymeni, R., Ugurtas, I.H, Zhao, E. M., Jowkar, H & Larson, A.(2006) A molecular assessment of phylogenetic relationships and lineage accumulation rates within the family Salamandridae (Amphibia, Caudata). Molecular Phylogenetics and Evolution, 41, 368–383.

    Wu, Y., Rovito, S.M., Papenfuss, T. J & Hanken, J. (2009) A new species of the genus Paramesotriton (Caudata: Salamandridae) from Guangxi Zhuang Autonomous Region, southern China. Zootaxa, 2060, 59–68.

    Ye, C. Y, Fei, L & Hu S.Q. (1993) Rare and Economic Amphibians of China. Sichuan Publishing House of Science & Technology, Chengdu ,China, 88~91. (in Chinese)

    Zhao, H.T, Che J., Zhou W.W., Chen Y.X, Zhao H.P & Zhang Y.P. (2008) A new species of Paramesotriton (Caudata: Salamandridae) from Guizhou Province, China. Zootaxa, 1775, 51–60.

    Zhang, P., Papenfuss, T.J., Wake, M.H., Qu, L & Wake, D.B. (2008) Phylogeny and biogeography of the family Salamandridae (Amphibia: Caudata) inferred from complete mitochondrial genomes. Molecular Phylogenetics and Evolution, 49, 586–597.